EnhancerDB
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  3. rs2788078[chr6:37113546]
Enhancers that have rs2788078[chr6:37113546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37090285 37118455 enh23203
Bone Marrow (K562) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2788078[chr6:37113546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37113535 37113556 IRF1 JASPAR yes 101392006
chr6 37113536 37113549 POU2F2 JASPAR yes 101392007
chr6 37113539 37113551 IRF1 JASPAR yes 101392008
chr6 37113544 37113548 YY1 TRANSFAC yes 101392009
Genes associated with rs2788078[chr6:37113546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More