EnhancerDB
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  3. rs2796170[chr1:234900093]
Enhancers that have rs2796170[chr1:234900093]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2796170[chr1:234900093]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234897364 234901169 ZNF274 GTRD no Cervix (HeLa-S3) 21397677
chr1 234898174 234900462 ZNF274 GTRD no Bone Marrow (K562) 21397679
chr1 234898284 234900422 ZNF274 GTRD no Bone Marrow (K562) 21397680
chr1 234898757 234900914 ZNF274 GTRD no Bone Marrow (K562) 21397686
chr1 234898778 234900508 ZNF274 GTRD no Bone Marrow (K562) 21397688
chr1 234898897 234900152 ZNF274 GTRD no Cervix (HeLa-S3) 21397695
chr1 234899591 234900207 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397723
chr1 234899653 234900197 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397724
chr1 234899677 234900301 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397725
chr1 234899767 234900137 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397728
chr1 234899878 234900502 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397731
chr1 234900086 234900097 TFAP2A JASPAR yes 36313046
Genes associated with rs2796170[chr1:234900093], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More