EnhancerDB
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  3. rs2796171[chr1:234901065]
Enhancers that have rs2796171[chr1:234901065]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2796171[chr1:234901065]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234897364 234901169 ZNF274 GTRD no Cervix (HeLa-S3) 21397677
chr1 234900453 234901107 ZNF274 GTRD no Bone Marrow (K562) 21397732
chr1 234900469 234901101 ZNF274 GTRD no Bone Marrow (K562) 21397733
chr1 234900548 234901085 MYOD GTRD no Muscle (Myoblast) 21397734
chr1 234901058 234901068 GABPA JASPAR yes 36313176
chr1 234901059 234901072 ATF4 JASPAR yes 36313177
chr1 234901060 234901066 ETS1 JASPAR yes 36313178
chr1 234901060 234901066 SPI1 JASPAR yes 36313179
Genes associated with rs2796171[chr1:234901065], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More