EnhancerDB
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  3. rs2802771[chr1:203522072]
Enhancers that have rs2802771[chr1:203522072]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs2802771[chr1:203522072]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203518802 203522161 ZNF274 GTRD no Cervix (HeLa-S3) 21369442
chr1 203518877 203522236 ZBTB33 GTRD no Brain (SK-N-SH) 21369443
chr1 203520808 203522075 ZBTB33 GTRD no Brain (SK-N-SH) 21369480
chr1 203521080 203522146 ZBTB33 GTRD no Brain (SK-N-SH) 21369483
chr1 203522068 203522081 POU3F3 JASPAR yes 34639212
chr1 203522068 203522083 FOXA1 JASPAR yes 34639213
chr1 203522069 203522081 FOXI1 JASPAR yes 34639214
chr1 203522069 203522081 POU3F1 JASPAR yes 34639215
chr1 203522070 203522078 FOXL1 JASPAR yes 34639216
chr1 203522070 203522082 FOXC2 JASPAR yes 34639217
chr1 203522070 203522084 FOXF2 JASPAR yes 34639218
chr1 203522071 203522079 FOXG1 JASPAR yes 34639219
chr1 203522071 203522082 FOXB1 JASPAR yes 34639220
chr1 203522071 203522082 FOXC1 JASPAR yes 34639221
Genes associated with rs2802771[chr1:203522072], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 203595689 203713209 + ATP2B4 ENSG00000058668.10 203595689 73617 Esophagus 1.33404e-14 1741