EnhancerDB
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  3. rs2806868[chr1:117424411]
Enhancers that have rs2806868[chr1:117424411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs2806868[chr1:117424411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117424381 117425066 ZNF143 GTRD no Epithelial (MCF-7) 21334063
chr1 117424381 117425066 ZNF143 GTRD no Epithelial (MCF-7) 107825131
chr1 117424404 117424423 RFX2 JASPAR yes 31848463
chr1 117424408 117424424 RFX5 JASPAR yes 31848464
chr1 117424411 117424741 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334064
Genes associated with rs2806868[chr1:117424411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More