EnhancerDB
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  3. rs2821226[chr1:203517292]
Enhancers that have rs2821226[chr1:203517292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs2821226[chr1:203517292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203516480 203518181 ZNF274 GTRD no Cervix (HeLa-S3) 21369434
chr1 203516793 203518222 ZNF274 GTRD no Cervix (HeLa-S3) 21369435
chr1 203517193 203517457 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369436
chr1 203517280 203517888 ZNF274 GTRD no Cervix (HeLa-S3) 21369437
chr1 203517283 203517294 FOS JASPAR yes 34638439
chr1 203517283 203517294 FOSL1 JASPAR yes 34638440
chr1 203517283 203517294 JUND JASPAR yes 34638441
chr1 203517284 203517295 FOSL2 JASPAR yes 34638442
chr1 203517284 203517295 JUNB JASPAR yes 34638443
chr1 203517284 203517295 NFE2L2 JASPAR yes 34638444
chr1 203517284 203517298 JUN JASPAR yes 34638445
chr1 203517285 203517296 BATF JASPAR yes 34638446
chr1 203517292 203517301 NKX3-2 JASPAR yes 34638447
Genes associated with rs2821226[chr1:203517292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More