EnhancerDB
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  3. rs28366488[chr1:235156640]
Enhancers that have rs28366488[chr1:235156640]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs28366488[chr1:235156640]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235155958 235156869 ZNF274 GTRD no Bone Marrow (K562) 21403182
chr1 235156079 235156839 ZNF274 GTRD no Cervix (HeLa-S3) 21403183
chr1 235156112 235156869 ZNF274 GTRD no Bone Marrow (K562) 21403184
chr1 235156210 235156681 ZNF274 GTRD no Bone Marrow (K562) 21403186
chr1 235156221 235156736 ZNF274 GTRD no Liver (HepG2) 21403187
chr1 235156303 235156707 ZNF274 GTRD no Bone Marrow (K562) 21403191
chr1 235156311 235156642 ZNF274 GTRD no Blood (GM12878) 21403192
chr1 235156576 235157083 ZNF274 GTRD no Liver (HepG2) 21403194
chr1 235156637 235156654 ESR1 JASPAR yes 36343479
Genes associated with rs28366488[chr1:235156640], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More