EnhancerDB
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  3. rs28366829[chr16:3903484]
Enhancers that have rs28366829[chr16:3903484]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 3901576 3926575 enh3861
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28366829[chr16:3903484]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 3903472 3903485 SMAD2 JASPAR yes 9235046
chr16 3903479 3903494 SCRT1 JASPAR yes 9235047
chr16 3903480 3903490 ID4 JASPAR yes 9235048
chr16 3903480 3903490 TCF3 JASPAR yes 9235049
chr16 3903480 3903490 TCF4 JASPAR yes 9235050
chr16 3903481 3903490 SNAI2 JASPAR yes 9235051
chr16 3903482 3903487 USF2 TRANSFAC yes 9235052
Genes associated with rs28366829[chr16:3903484], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More