EnhancerDB
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  3. rs28376221[chr12:122028830]
Enhancers that have rs28376221[chr12:122028830]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122025285 122042415 enh15061
Bone Marrow (K562) Skin (Keratinocyte) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Uterus Neural Stem Cells (H9) Thymus Stomach
chr12 122028609 122028883 vista15183
VISTA
Transcript factors that have rs28376221[chr12:122028830]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122027712 122030866 ZNF274 GTRD no Blood (GM12878) 108065099
chr12 122027761 122031013 ZNF274 GTRD no Blood (GM12878) 108065100
chr12 122027847 122030416 ZNF274 GTRD no Blood (GM12878) 108065101
chr12 122027903 122028856 MYOD GTRD no Muscle (Myoblast) 108065102
chr12 122028003 122029823 ZNF274 GTRD no Blood (GM12878) 108065103
chr12 122028368 122030909 ZNF274 GTRD no Blood (GM12878) 108065106
chr12 122028379 122030504 ZNF274 GTRD no Blood (GM12878) 108065107
chr12 122028396 122029895 ZNF274 GTRD no Blood (GM12878) 108065108
chr12 122028403 122028903 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065109
chr12 122028449 122028853 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21579240
chr12 122028449 122028853 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108065110
chr12 122028458 122028858 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21579241
chr12 122028458 122028858 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108065111
chr12 122028482 122029002 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065112
chr12 122028518 122028898 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065117
chr12 122028533 122028863 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065118
chr12 122028560 122028840 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108065120
chr12 122028565 122028895 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065121
chr12 122028574 122028894 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065123
chr12 122028577 122028841 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065124
chr12 122028584 122028844 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108065125
chr12 122028589 122028869 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065127
chr12 122028625 122029309 ZBTB33 GTRD no Brain (SK-N-SH) 108065128
chr12 122028629 122029452 ZNF274 GTRD no Bone Marrow (K562) 21579243
chr12 122028629 122029452 ZNF274 GTRD no Bone Marrow (K562) 108065129
chr12 122028640 122028892 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065130
chr12 122028651 122029241 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065131
chr12 122028651 122029679 ZNF274 GTRD no Blood (GM12878) 108065132
chr12 122028666 122028913 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065133
chr12 122028672 122029102 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065134
chr12 122028705 122029677 ZNF274 GTRD no Blood (GM12878) 108065135
chr12 122028713 122029663 ZNF274 GTRD no Blood (GM12878) 108065136
chr12 122028713 122032436 ZNF143 GTRD no Epithelial (MCF-7) 108065137
chr12 122028738 122030756 ZNF274 GTRD no Blood (GM12878) 108065138
chr12 122028751 122032269 ZNF143 GTRD no Epithelial (MCF-7) 108065139
chr12 122028759 122029904 ZNF274 GTRD no Blood (GM12878) 108065140
chr12 122028767 122030509 ZNF274 GTRD no Blood (GM12878) 108065141
chr12 122028795 122029585 ZNF274 GTRD no Blood (GM12878) 108065142
chr12 122028809 122028830 IRF1 JASPAR yes 82490587
chr12 122028809 122028830 IRF1 JASPAR yes 124230630
chr12 122028810 122028831 IRF1 JASPAR yes 82490589
chr12 122028810 122028831 IRF1 JASPAR yes 124230632
chr12 122028811 122028832 IRF1 JASPAR yes 82490591
chr12 122028811 122028832 IRF1 JASPAR yes 124230634
chr12 122028812 122028833 IRF1 JASPAR yes 82490593
chr12 122028812 122028833 IRF1 JASPAR yes 124230636
chr12 122028814 122028835 IRF1 JASPAR yes 82490596
chr12 122028814 122028835 IRF1 JASPAR yes 124230639
chr12 122028815 122028830 FOXP1 JASPAR yes 82490597
chr12 122028815 122028830 FOXP1 JASPAR yes 124230640
chr12 122028816 122028831 FOXP1 JASPAR yes 82490598
chr12 122028816 122028831 FOXP1 JASPAR yes 124230641
chr12 122028817 122028832 FOXP1 JASPAR yes 82490599
chr12 122028817 122028832 FOXP1 JASPAR yes 124230642
chr12 122028818 122028833 FOXP1 JASPAR yes 82490600
chr12 122028818 122028833 FOXP1 JASPAR yes 124230643
chr12 122028819 122028834 FOXP1 JASPAR yes 82490601
chr12 122028819 122028834 FOXP1 JASPAR yes 124230644
chr12 122028821 122028836 FOXP1 JASPAR yes 82490602
chr12 122028821 122028836 MEF2C JASPAR yes 82490603
chr12 122028821 122028836 FOXP1 JASPAR yes 124230645
chr12 122028821 122028836 MEF2C JASPAR yes 124230646
chr12 122028823 122028838 FOXP1 JASPAR yes 82490604
chr12 122028823 122028838 FOXP1 JASPAR yes 124230647
chr12 122028829 122028840 NFIL3 JASPAR yes 82490605
chr12 122028829 122028840 NFIL3 JASPAR yes 124230648
Genes associated with rs28376221[chr12:122028830], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More