EnhancerDB
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  3. rs28385532[chr17:65461016]
Enhancers that have rs28385532[chr17:65461016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs28385532[chr17:65461016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65460996 65461016 TP63 JASPAR yes 55507159
chr17 65461013 65461025 PBX1 JASPAR yes 55507160
chr17 65461014 65461027 DUXA JASPAR yes 55507161
chr17 65461014 65461028 ONECUT1 JASPAR yes 55507162
chr17 65461014 65461028 ONECUT2 JASPAR yes 55507163
chr17 65461014 65461028 ONECUT3 JASPAR yes 55507164
chr17 65461015 65461025 PAX3 JASPAR yes 55507165
chr17 65461015 65461025 PAX7 JASPAR yes 55507166
chr17 65461015 65461026 DUX4 JASPAR yes 55507167
Genes associated with rs28385532[chr17:65461016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More