EnhancerDB
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  3. rs28414740[chr15:67427414]
Enhancers that have rs28414740[chr15:67427414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67361222 67430135 enh3672
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28414740[chr15:67427414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67426614 67427525 ZNF143 GTRD no Epithelial (MCF-7) 21662776
chr15 67426614 67427525 ZNF143 GTRD no Epithelial (MCF-7) 108149709
chr15 67426639 67427556 ZNF143 GTRD no Epithelial (MCF-7) 21662782
chr15 67426639 67427556 ZNF143 GTRD no Epithelial (MCF-7) 108149715
chr15 67426651 67427494 ZNF143 GTRD no Epithelial (MCF-7) 21662784
chr15 67426651 67427494 ZNF143 GTRD no Epithelial (MCF-7) 108149718
chr15 67426655 67427712 ZNF143 GTRD no Epithelial (MCF-7) 21662785
chr15 67426655 67427712 ZNF143 GTRD no Epithelial (MCF-7) 108149719
chr15 67426712 67427590 ZNF143 GTRD no Epithelial (MCF-7) 21662789
chr15 67426712 67427590 ZNF143 GTRD no Epithelial (MCF-7) 108149725
chr15 67426811 67427460 ZNF143 GTRD no Epithelial (MCF-7) 21662792
chr15 67426811 67427460 ZNF143 GTRD no Epithelial (MCF-7) 108149728
chr15 67426817 67427461 ZNF143 GTRD no Epithelial (MCF-7) 21662793
chr15 67426817 67427461 ZNF143 GTRD no Epithelial (MCF-7) 108149729
chr15 67426817 67427480 ZNF143 GTRD no Epithelial (MCF-7) 21662794
chr15 67426817 67427480 ZNF143 GTRD no Epithelial (MCF-7) 108149730
chr15 67427405 67427416 NRF1 JASPAR yes 24211657
chr15 67427407 67427416 SNAI2 JASPAR yes 24211659
chr15 67427407 67427417 ID4 JASPAR yes 24211660
chr15 67427407 67427417 NHLH1 JASPAR yes 24211661
chr15 67427407 67427417 TCF3 JASPAR yes 24211662
chr15 67427407 67427417 TCF4 JASPAR yes 24211663
chr15 67427408 67427423 RFX5 JASPAR yes 24211664
Genes associated with rs28414740[chr15:67427414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More