EnhancerDB
  1. Home
  2. SNP
  3. rs28420469[chr17:56007805]
Enhancers that have rs28420469[chr17:56007805]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28420469[chr17:56007805]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56007798 56007809 FOS JASPAR yes 55000911
chr17 56007798 56007809 FOSL1 JASPAR yes 55000912
chr17 56007798 56007809 JUND JASPAR yes 55000913
chr17 56007799 56007813 JUN JASPAR yes 55000914
chr17 56007800 56007807 JUN TRANSFAC yes 55000915
chr17 56007800 56007811 BATF JASPAR yes 55000916
Genes associated with rs28420469[chr17:56007805], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More