EnhancerDB
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  3. rs2842175[chr1:44023615]
Enhancers that have rs2842175[chr1:44023615]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43989845 44027077 enh11814
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs2842175[chr1:44023615]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 44023613 44023628 TFAP2A JASPAR yes 28505799
Genes associated with rs2842175[chr1:44023615], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 43990858 44089343 + PTPRF ENSG00000142949.12 43990858 0 Esophagus 7.04169e-08 606