EnhancerDB
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  3. rs28422004[chr1:19279048]
Enhancers that have rs28422004[chr1:19279048]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28422004[chr1:19279048]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19277822 19279058 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802290
chr1 19279036 19279056 TP63 JASPAR yes 27165530
chr1 19279037 19279055 TP53 JASPAR yes 27165531
chr1 19279037 19279055 TP63 JASPAR yes 27165532
chr1 19279037 19279055 TP73 JASPAR yes 27165533
chr1 19279038 19279053 TP53 JASPAR yes 27165534
chr1 19279046 19279058 YY1 JASPAR yes 27165535
Genes associated with rs28422004[chr1:19279048], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More