EnhancerDB
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  3. rs28435861[chr17:57840533]
Enhancers that have rs28435861[chr17:57840533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs28435861[chr17:57840533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57840121 57840565 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108276703
chr17 57840518 57840534 POU4F3 JASPAR yes 55079025
Genes associated with rs28435861[chr17:57840533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More