EnhancerDB
  1. Home
  2. SNP
  3. rs28437193[chr18:57623620]
Enhancers that have rs28437193[chr18:57623620]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57615485 57630775 enh4882
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs28437193[chr18:57623620]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57623223 57624162 P63 GTRD no Skin (Keratinocyte) 21825623
chr18 57623244 57623989 P63 GTRD no Skin (Keratinocyte) 21825624
chr18 57623286 57624038 P63 GTRD no Skin (Keratinocyte) 21825625
chr18 57623432 57623961 P63 GTRD no Skin (Keratinocyte) 21825626
chr18 57623613 57623633 RREB1 JASPAR yes 111068167
chr18 57623616 57623621 SP1 TRANSFAC yes 111068168
chr18 57623616 57623636 RREB1 JASPAR yes 111068169
chr18 57623618 57623638 RREB1 JASPAR yes 111068170
chr18 57623620 57623635 RUNX2 JASPAR yes 111068171
chr18 57623620 57623641 ZNF263 JASPAR yes 111068172
Genes associated with rs28437193[chr18:57623620], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More