EnhancerDB
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  3. rs28437321[chr16:4335622]
Enhancers that have rs28437321[chr16:4335622]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs28437321[chr16:4335622]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4334425 4335774 TCF7L2 GTRD no Colon (HCT116) 21686288
chr16 4334599 4335731 ZNF143 GTRD no Epithelial (MCF-7) 21686290
chr16 4334622 4335802 TCF7L2 GTRD no Colon (HCT116) 21686291
chr16 4334630 4335764 ZNF143 GTRD no Epithelial (MCF-7) 21686292
chr16 4334663 4335720 TCF7L2 GTRD no Colon (HCT116) 21686294
chr16 4334666 4335772 ZNF143 GTRD no Epithelial (MCF-7) 21686295
chr16 4334683 4335653 ZNF143 GTRD no Epithelial (MCF-7) 21686296
chr16 4334712 4335625 TCF7L2 GTRD no Colon (HCT116) 21686297
chr16 4335603 4335622 PAX5 JASPAR yes 9266355
Genes associated with rs28437321[chr16:4335622], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More