EnhancerDB
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  3. rs28468398[chr16:85221051]
Enhancers that have rs28468398[chr16:85221051]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28468398[chr16:85221051]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85219535 85221509 ZNF143 GTRD no Epithelial (MCF-7) 21720581
chr16 85219725 85221344 TCF7L2 GTRD no Colon (HCT116) 21720586
chr16 85219744 85221698 ZNF143 GTRD no Epithelial (MCF-7) 21720587
chr16 85219857 85221576 ZBTB33 GTRD no Brain (SK-N-SH) 21720592
chr16 85219880 85221314 TCF7L2 GTRD no Colon (HCT116) 21720594
chr16 85219922 85221401 TCF7L2 GTRD no Colon (HCT116) 21720596
chr16 85219951 85221062 ZBTB33 GTRD no Brain (SK-N-SH) 21720598
chr16 85219968 85221363 TCF7L2 GTRD no Colon (HCT116) 21720599
chr16 85220013 85221724 ZNF274 GTRD no Liver (HepG2) 21720602
chr16 85220736 85221316 TCF7L2 GTRD no Colon (HCT116) 21720631
chr16 85220891 85221354 ZNF274 GTRD no Liver (HepG2) 21720632
chr16 85220916 85222563 TCF7L2 GTRD no Colon (HCT116) 21720633
chr16 85220928 85222615 ZNF143 GTRD no Epithelial (MCF-7) 21720634
chr16 85220936 85222669 ZNF274 GTRD no Liver (HepG2) 21720635
chr16 85221031 85221052 ZNF263 JASPAR yes 12029947
chr16 85221032 85221053 ZNF263 JASPAR yes 12029948
Genes associated with rs28468398[chr16:85221051], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More