EnhancerDB
  1. Home
  2. SNP
  3. rs28475247[chr6:43985545]
Enhancers that have rs28475247[chr6:43985545]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28475247[chr6:43985545]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43985539 43985551 YY1 JASPAR yes 101813034
chr6 43985543 43985554 CEBPB JASPAR yes 101813035
chr6 43985544 43985557 NFKB1 JASPAR yes 101813036
chr6 43985544 43985557 NFKB2 JASPAR yes 101813037
Genes associated with rs28475247[chr6:43985545], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 43543887 43586701 + POLH ENSG00000170734.7 43543887 398844 Esophagus 0.0761101 6620