EnhancerDB
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  3. rs28498239[chr17:65421321]
Enhancers that have rs28498239[chr17:65421321]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs28498239[chr17:65421321]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65421315 65421335 RREB1 JASPAR yes 55501932
chr17 65421317 65421337 RREB1 JASPAR yes 55501933
chr17 65421319 65421339 RREB1 JASPAR yes 55501934
chr17 65421321 65421341 RREB1 JASPAR yes 55501935
Genes associated with rs28498239[chr17:65421321], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More