EnhancerDB
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  3. rs28509376[chr1:235141547]
Enhancers that have rs28509376[chr1:235141547]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs28509376[chr1:235141547]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235141531 235141549 IRF2 JASPAR yes 36341238
chr1 235141538 235141554 POU4F2 JASPAR yes 36341241
chr1 235141538 235141554 POU4F3 JASPAR yes 36341242
chr1 235141540 235141554 POU4F1 JASPAR yes 36341243
chr1 235141544 235141560 SOX8 JASPAR yes 36341244
Genes associated with rs28509376[chr1:235141547], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More