EnhancerDB
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  3. rs28530722[chr12:122590338]
Enhancers that have rs28530722[chr12:122590338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs28530722[chr12:122590338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122590323 122590338 FOXP1 JASPAR yes 124266446
chr12 122590324 122590339 FOXP1 JASPAR yes 124266447
chr12 122590325 122590340 FOXP1 JASPAR yes 124266448
chr12 122590325 122590346 IRF1 JASPAR yes 124266449
chr12 122590326 122590341 FOXP1 JASPAR yes 124266450
chr12 122590329 122590344 STAT2 JASPAR yes 124266451
chr12 122590338 122590352 SPI1 JASPAR yes 124266452
chr12 122590338 122590352 SPIC JASPAR yes 124266453
Genes associated with rs28530722[chr12:122590338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More