EnhancerDB
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  3. rs28570998[chr1:203514754]
Enhancers that have rs28570998[chr1:203514754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs28570998[chr1:203514754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203510673 203515004 ZNF274 GTRD no Cervix (HeLa-S3) 21369339
chr1 203510673 203515004 ZNF274 GTRD no Cervix (HeLa-S3) 21369340
chr1 203511742 203515019 ZNF274 GTRD no Cervix (HeLa-S3) 21369341
chr1 203511958 203514933 ZNF274 GTRD no Cervix (HeLa-S3) 21369342
chr1 203512179 203514811 ZBTB33 GTRD no Lung (A549) 21369349
chr1 203512208 203514829 ZBTB33 GTRD no Brain (SK-N-SH) 21369351
chr1 203512221 203515019 ZNF274 GTRD no Cervix (HeLa-S3) 21369352
chr1 203512233 203514864 ZBTB33 GTRD no Brain (SK-N-SH) 21369353
chr1 203512277 203514843 ZNF274 GTRD no Cervix (HeLa-S3) 21369356
chr1 203512393 203514863 ZNF274 GTRD no Cervix (HeLa-S3) 21369366
chr1 203512439 203514831 ZBTB33 GTRD no Brain (SK-N-SH) 21369372
chr1 203513753 203514860 ZBTB33 GTRD no Brain (SK-N-SH) 21369412
chr1 203513755 203514839 ZBTB33 GTRD no Brain (SK-N-SH) 21369413
chr1 203513760 203514811 ZBTB33 GTRD no Brain (SK-N-SH) 21369414
chr1 203513801 203514785 ZBTB33 GTRD no Brain (SK-N-SH) 21369415
chr1 203513817 203514788 ZBTB33 GTRD no Brain (SK-N-SH) 21369418
chr1 203513841 203514795 ZBTB33 GTRD no Brain (SK-N-SH) 21369419
chr1 203514022 203514855 ZNF274 GTRD no Cervix (HeLa-S3) 21369432
chr1 203514033 203514804 ZBTB33 GTRD no Lung (A549) 21369433
chr1 203514748 203514762 SPIC JASPAR yes 34638046
Genes associated with rs28570998[chr1:203514754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More