EnhancerDB
  1. Home
  2. SNP
  3. rs28605425[chr12:122596148]
Enhancers that have rs28605425[chr12:122596148]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs28605425[chr12:122596148]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122596141 122596153 PKNOX1 JASPAR yes 124267351
chr12 122596141 122596153 PKNOX2 JASPAR yes 124267352
chr12 122596141 122596153 TGIF1 JASPAR yes 124267353
chr12 122596141 122596153 TGIF2 JASPAR yes 124267354
chr12 122596142 122596152 NHLH1 JASPAR yes 124267355
Genes associated with rs28605425[chr12:122596148], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More