EnhancerDB
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Enhancers that have rs28627972[chr14:55565471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55550545 55578795 enh15631
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs28627972[chr14:55565471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55564854 55565514 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21619978
chr14 55564854 55565514 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103547
chr14 55564857 55565541 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21619979
chr14 55564857 55565541 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103548
chr14 55564860 55565490 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21619980
chr14 55564860 55565490 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103549
chr14 55565114 55565494 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620005
chr14 55565114 55565494 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103577
chr14 55565315 55565695 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620008
chr14 55565315 55565695 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103580
chr14 55565315 55565695 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103581
chr14 55565455 55565476 IRF1 JASPAR yes 115529123
chr14 55565456 55565471 FOXP1 JASPAR yes 115529124
chr14 55565458 55565473 FOXP1 JASPAR yes 115529125
chr14 55565459 55565480 IRF1 JASPAR yes 115529126
chr14 55565460 55565475 FOXP1 JASPAR yes 115529127
chr14 55565463 55565477 SPIC JASPAR yes 115529128
chr14 55565463 55565477 STAT1 JASPAR yes 115529129
chr14 55565463 55565478 PRDM1 JASPAR yes 115529130
chr14 55565463 55565478 STAT2 JASPAR yes 115529131
chr14 55565463 55565484 IRF1 JASPAR yes 115529132
chr14 55565465 55565486 IRF1 JASPAR yes 115529133
chr14 55565467 55565488 IRF1 JASPAR yes 115529134
chr14 55565467 55565488 ZNF263 JASPAR yes 115529135
Genes associated with rs28627972[chr14:55565471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More