EnhancerDB
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  3. rs28638379[chr1:8473985]
Enhancers that have rs28638379[chr1:8473985]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28638379[chr1:8473985]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8473971 8473991 TP63 JASPAR yes 26550873
chr1 8473972 8473990 TP53 JASPAR yes 26550874
chr1 8473972 8473990 TP73 JASPAR yes 26550875
Genes associated with rs28638379[chr1:8473985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More