EnhancerDB
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  3. rs28643488[chr1:8257782]
Enhancers that have rs28643488[chr1:8257782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8240061 8281055 enh11465
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 8257762 8258040 vista238
VISTA
Transcript factors that have rs28643488[chr1:8257782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8256844 8258165 ZNF143 GTRD no Epithelial (MCF-7) 107801964
chr1 8257769 8257784 MEF2C JASPAR yes 26526393
chr1 8257769 8257784 MEF2C JASPAR yes 118224442
chr1 8257776 8257791 FOXP1 JASPAR yes 26526394
chr1 8257776 8257791 FOXP1 JASPAR yes 118224443
chr1 8257776 8257797 IRF1 JASPAR yes 26526395
chr1 8257776 8257797 IRF1 JASPAR yes 118224444
chr1 8257777 8257798 IRF1 JASPAR yes 26526396
chr1 8257777 8257798 IRF1 JASPAR yes 118224445
chr1 8257778 8257793 FOXP1 JASPAR yes 26526397
chr1 8257778 8257793 LEF1 JASPAR yes 26526398
chr1 8257778 8257793 FOXP1 JASPAR yes 118224446
chr1 8257778 8257793 LEF1 JASPAR yes 118224447
chr1 8257778 8257799 IRF1 JASPAR yes 26526399
chr1 8257778 8257799 IRF1 JASPAR yes 118224448
chr1 8257779 8257800 IRF1 JASPAR yes 26526400
chr1 8257779 8257800 IRF1 JASPAR yes 118224449
Genes associated with rs28643488[chr1:8257782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More