EnhancerDB
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  3. rs28648970[chr4:148683164]
Enhancers that have rs28648970[chr4:148683164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 148667325 148718095 enh37177
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs28648970[chr4:148683164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 148683153 148683168 FOXP1 JASPAR yes 93518335
chr4 148683153 148683174 IRF1 JASPAR yes 93518336
chr4 148683155 148683170 FOXP1 JASPAR yes 93518337
chr4 148683158 148683173 MEF2A JASPAR yes 93518338
chr4 148683159 148683174 FOXP1 JASPAR yes 93518339
chr4 148683159 148683174 MEF2C JASPAR yes 93518340
chr4 148683159 148683180 IRF1 JASPAR yes 93518341
chr4 148683160 148683172 FOXC2 JASPAR yes 93518342
chr4 148683160 148683172 MEF2A JASPAR yes 93518343
chr4 148683160 148683172 MEF2B JASPAR yes 93518344
chr4 148683160 148683172 MEF2D JASPAR yes 93518345
chr4 148683161 148683171 MEF2A JASPAR yes 93518346
chr4 148683162 148683166 YY1 TRANSFAC yes 93518347
chr4 148683163 148683175 IRF1 JASPAR yes 93518348
chr4 148683163 148683177 IRF7 JASPAR yes 93518349
Genes associated with rs28648970[chr4:148683164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More