EnhancerDB
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  3. rs28650213[chr1:235139557]
Enhancers that have rs28650213[chr1:235139557]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs28650213[chr1:235139557]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235139426 235139884 ZNF143 GTRD no Epithelial (MCF-7) 21402914
chr1 235139557 235139566 PITX3 JASPAR yes 36340965
chr1 235139557 235139567 GSC JASPAR yes 36340966
chr1 235139557 235139568 FOXH1 JASPAR yes 36340967
Genes associated with rs28650213[chr1:235139557], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More