EnhancerDB
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  3. rs28654716[chr1:8258037]
Enhancers that have rs28654716[chr1:8258037]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8240061 8281055 enh11465
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 8257762 8258040 vista238
VISTA
Transcript factors that have rs28654716[chr1:8258037]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8256844 8258165 ZNF143 GTRD no Epithelial (MCF-7) 107801964
chr1 8258032 8258041 RUNX2 JASPAR yes 26526454
chr1 8258032 8258041 RUNX2 JASPAR yes 118224503
chr1 8258032 8258042 RUNX3 JASPAR yes 26526455
chr1 8258032 8258042 RUNX3 JASPAR yes 118224504
Genes associated with rs28654716[chr1:8258037], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More