EnhancerDB
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  3. rs28665176[chr1:235135642]
Enhancers that have rs28665176[chr1:235135642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs28665176[chr1:235135642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235135223 235135944 ZNF274 GTRD no Bone Marrow (K562) 21402897
chr1 235135273 235135899 ZNF274 GTRD no Bone Marrow (K562) 21402898
chr1 235135347 235135795 ZNF274 GTRD no Cervix (HeLa-S3) 21402899
chr1 235135630 235135645 PRDM1 JASPAR yes 36340341
chr1 235135638 235135649 E2F1 JASPAR yes 36340342
chr1 235135638 235135659 ZNF263 JASPAR yes 36340343
chr1 235135639 235135650 E2F4 JASPAR yes 36340344
chr1 235135639 235135650 E2F6 JASPAR yes 36340345
chr1 235135641 235135649 E2F1 JASPAR yes 36340346
Genes associated with rs28665176[chr1:235135642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More