EnhancerDB
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  3. rs28670020[chr6:30764838]
Enhancers that have rs28670020[chr6:30764838]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28670020[chr6:30764838]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30764824 30764845 REST JASPAR yes 101051289
chr6 30764825 30764844 REST JASPAR yes 101051290
chr6 30764836 30764847 GCM1 JASPAR yes 101051291
Genes associated with rs28670020[chr6:30764838], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More