EnhancerDB
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  3. rs28708990[chr15:67153765]
Enhancers that have rs28708990[chr15:67153765]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67152440 67182466 enh3668
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28708990[chr15:67153765]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67153505 67153995 SOX2 GTRD no Neural Stem Cells (H9) 21661477
chr15 67153526 67153787 SOX2 GTRD no Neural Stem Cells (H9) 21661478
chr15 67153530 67153852 SOX2 GTRD no Neural Stem Cells (H9) 21661479
chr15 67153540 67153817 SOX2 GTRD no Neural Stem Cells (H9) 21661480
chr15 67153750 67153766 POU4F2 JASPAR yes 24182296
Genes associated with rs28708990[chr15:67153765], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More