EnhancerDB
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  3. rs28729252[chr16:85285228]
Enhancers that have rs28729252[chr16:85285228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28729252[chr16:85285228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85283814 85285381 ZNF143 GTRD no Epithelial (MCF-7) 21722056
chr16 85284778 85285241 ZNF274 GTRD no Liver (HepG2) 21722068
chr16 85285077 85285417 ZNF143 GTRD no Epithelial (MCF-7) 21722070
chr16 85285228 85285241 TFAP2A JASPAR yes 12038890
chr16 85285228 85285241 TFAP2B JASPAR yes 12038891
chr16 85285228 85285241 TFAP2C JASPAR yes 12038892
Genes associated with rs28729252[chr16:85285228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More