EnhancerDB
  1. Home
  2. SNP
  3. rs28744112[chr6:30783334]
Enhancers that have rs28744112[chr6:30783334]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28744112[chr6:30783334]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30783322 30783343 IRF1 JASPAR yes 101054089
chr6 30783332 30783346 GATA2 JASPAR yes 101054090
chr6 30783333 30783349 SRF JASPAR yes 101054091
chr6 30783333 30783351 SRF JASPAR yes 101054092
chr6 30783334 30783340 MYC TRANSFAC yes 101054093
Genes associated with rs28744112[chr6:30783334], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More