EnhancerDB
  1. Home
  2. SNP
  3. rs28744253[chr6:31177999]
Enhancers that have rs28744253[chr6:31177999]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 31167025 31180175 enh9031
Bone Marrow (K562) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs28744253[chr6:31177999]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 31177991 31178001 GSC2 JASPAR yes 101080302
chr6 31177991 31178001 GSC JASPAR yes 101080303
chr6 31177992 31178000 OTX1 JASPAR yes 101080304
chr6 31177992 31178000 OTX2 JASPAR yes 101080305
chr6 31177992 31178000 RHOXF1 JASPAR yes 101080306
chr6 31177992 31178001 PITX3 JASPAR yes 101080307
Genes associated with rs28744253[chr6:31177999], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More