EnhancerDB
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  3. rs2883881[chr6:108897386]
Enhancers that have rs2883881[chr6:108897386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2883881[chr6:108897386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108897381 108897391 MAX JASPAR yes 104179130
chr6 108897381 108897393 HES5 JASPAR yes 104179131
chr6 108897381 108897393 PKNOX1 JASPAR yes 104179132
chr6 108897381 108897393 PKNOX2 JASPAR yes 104179133
chr6 108897381 108897393 TGIF2 JASPAR yes 104179134
chr6 108897382 108897392 CLOCK JASPAR yes 104179135
chr6 108897382 108897392 NEUROG2 JASPAR yes 104179136
Genes associated with rs2883881[chr6:108897386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More