EnhancerDB
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  3. rs2884570[chr14:55102129]
Enhancers that have rs2884570[chr14:55102129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55101597 55134083 enh3199
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs2884570[chr14:55102129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55101594 55104991 ZNF143 GTRD no Epithelial (MCF-7) 21619424
chr14 55101594 55104991 ZNF143 GTRD no Epithelial (MCF-7) 108103110
chr14 55101602 55105198 ZNF274 GTRD no Blood (GM12878) 108103111
chr14 55101698 55105012 ZNF274 GTRD no Blood (GM12878) 108103112
chr14 55101764 55104980 ZBTB33 GTRD no Lung (A549) 108103113
chr14 55101778 55105011 ZNF274 GTRD no Cervix (HeLa-S3) 21619425
chr14 55101778 55105011 ZNF274 GTRD no Cervix (HeLa-S3) 108103114
chr14 55101890 55105042 ZNF274 GTRD no Bone Marrow (K562) 108103115
chr14 55101907 55104935 ZNF274 GTRD no Blood (GM12878) 108103116
chr14 55101961 55104936 ZNF274 GTRD no Cervix (HeLa-S3) 21619426
chr14 55101961 55104936 ZNF274 GTRD no Cervix (HeLa-S3) 108103117
chr14 55102119 55102140 IRF1 JASPAR yes 115494924
Genes associated with rs2884570[chr14:55102129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More