EnhancerDB
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  3. rs28860005[chr1:235131932]
Enhancers that have rs28860005[chr1:235131932]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs28860005[chr1:235131932]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235131922 235131933 FOXB1 JASPAR yes 36339761
chr1 235131924 235131932 FOXL1 JASPAR yes 36339762
chr1 235131928 235131941 POU3F3 JASPAR yes 36339763
chr1 235131929 235131941 POU3F1 JASPAR yes 36339764
chr1 235131929 235131942 POU2F2 JASPAR yes 36339765
chr1 235131930 235131938 FOXL1 JASPAR yes 36339766
chr1 235131930 235131939 POU3F4 JASPAR yes 36339767
chr1 235131930 235131941 FOXB1 JASPAR yes 36339768
Genes associated with rs28860005[chr1:235131932], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More