EnhancerDB
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  3. rs28883318[chr2:232562935]
Enhancers that have rs28883318[chr2:232562935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28883318[chr2:232562935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232562923 232562935 HES5 JASPAR yes 81738188
chr2 232562923 232562935 HES7 JASPAR yes 81738189
chr2 232562930 232562948 SRF JASPAR yes 81738190
chr2 232562932 232562947 MEF2A JASPAR yes 81738191
chr2 232562932 232562948 SRF JASPAR yes 81738192
chr2 232562932 232562950 SRF JASPAR yes 81738193
chr2 232562934 232562946 MEF2A JASPAR yes 81738194
chr2 232562934 232562946 MEF2B JASPAR yes 81738195
chr2 232562934 232562946 MEF2D JASPAR yes 81738196
chr2 232562935 232562945 MEF2A JASPAR yes 81738197
chr2 232562935 232562947 SRF JASPAR yes 81738198
Genes associated with rs28883318[chr2:232562935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More