EnhancerDB
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  3. rs28890780[chr6:30775590]
Enhancers that have rs28890780[chr6:30775590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28890780[chr6:30775590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30775579 30775590 E2F4 JASPAR yes 101052974
chr6 30775579 30775590 E2F6 JASPAR yes 101052975
chr6 30775580 30775591 E2F1 JASPAR yes 101052976
chr6 30775588 30775596 TBX15 JASPAR yes 101052977
chr6 30775588 30775596 TBX4 JASPAR yes 101052978
Genes associated with rs28890780[chr6:30775590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More