EnhancerDB
  1. Home
  2. SNP
  3. rs28896520[chr6:30775550]
Enhancers that have rs28896520[chr6:30775550]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28896520[chr6:30775550]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30775541 30775551 REL JASPAR yes 101052971
chr6 30775550 30775561 E2F1 JASPAR yes 101052972
chr6 30775550 30775562 E2F1 JASPAR yes 101052973
Genes associated with rs28896520[chr6:30775550], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More