EnhancerDB
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  3. rs28986796[chr6:30752594]
Enhancers that have rs28986796[chr6:30752594]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28986796[chr6:30752594]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30752591 30752606 FOXP1 JASPAR yes 101049130
chr6 30752592 30752607 FOXP1 JASPAR yes 101049131
chr6 30752593 30752608 FOXP1 JASPAR yes 101049132
chr6 30752594 30752609 FOXP1 JASPAR yes 101049133
Genes associated with rs28986796[chr6:30752594], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More