EnhancerDB
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  3. rs28986800[chr6:30775910]
Enhancers that have rs28986800[chr6:30775910]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28986800[chr6:30775910]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30775892 30775912 ESR1 JASPAR yes 101053024
chr6 30775896 30775914 ESR2 JASPAR yes 101053025
chr6 30775897 30775912 ESR2 JASPAR yes 101053026
chr6 30775902 30775915 NR2F1 JASPAR yes 101053027
chr6 30775904 30775915 ESRRB JASPAR yes 101053028
chr6 30775906 30775923 RARA JASPAR yes 101053029
Genes associated with rs28986800[chr6:30775910], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More