EnhancerDB
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  3. rs28994672[chr6:30754411]
Enhancers that have rs28994672[chr6:30754411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28994672[chr6:30754411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30754398 30754413 SOX21 JASPAR yes 101049533
chr6 30754407 30754421 GATA2 JASPAR yes 101049534
chr6 30754411 30754419 GATA3 JASPAR yes 101049535
Genes associated with rs28994672[chr6:30754411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More