EnhancerDB
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  3. rs28994675[chr6:30779372]
Enhancers that have rs28994675[chr6:30779372]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28994675[chr6:30779372]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30779370 30779381 FOXA1 JASPAR yes 101053510
chr6 30779370 30779385 FOXA1 JASPAR yes 101053511
chr6 30779371 30779383 FOXC2 JASPAR yes 101053512
chr6 30779371 30779391 RREB1 JASPAR yes 101053513
chr6 30779372 30779384 FOXI1 JASPAR yes 101053514
chr6 30779372 30779392 RREB1 JASPAR yes 101053515
Genes associated with rs28994675[chr6:30779372], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More