EnhancerDB
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  3. rs28994677[chr6:30781193]
Enhancers that have rs28994677[chr6:30781193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28994677[chr6:30781193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30781173 30781193 RREB1 JASPAR yes 101053810
chr6 30781175 30781195 RREB1 JASPAR yes 101053811
chr6 30781177 30781197 RREB1 JASPAR yes 101053812
chr6 30781179 30781194 RUNX2 JASPAR yes 101053813
chr6 30781180 30781200 RREB1 JASPAR yes 101053814
chr6 30781181 30781201 RREB1 JASPAR yes 101053815
chr6 30781182 30781202 RREB1 JASPAR yes 101053816
chr6 30781184 30781204 RREB1 JASPAR yes 101053817
chr6 30781186 30781206 RREB1 JASPAR yes 101053818
Genes associated with rs28994677[chr6:30781193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More