EnhancerDB
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  3. rs2908826[chr17:55548917]
Enhancers that have rs2908826[chr17:55548917]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2908826[chr17:55548917]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55548904 55548919 SCRT1 JASPAR yes 54958522
chr17 55548906 55548919 SCRT2 JASPAR yes 54958523
chr17 55548915 55548926 HOXC11 JASPAR yes 54958525
Genes associated with rs2908826[chr17:55548917], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More