EnhancerDB
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  3. rs2916121[chr17:65470937]
Enhancers that have rs2916121[chr17:65470937]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs2916121[chr17:65470937]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65470487 65471104 TCF7L2 GTRD no Colon (HCT116) 21782239
chr17 65470487 65471104 TCF7L2 GTRD no Colon (HCT116) 108285876
chr17 65470530 65471330 ZNF143 GTRD no Epithelial (MCF-7) 21782241
chr17 65470530 65471330 ZNF143 GTRD no Epithelial (MCF-7) 108285878
chr17 65470552 65471283 ZNF143 GTRD no Epithelial (MCF-7) 21782243
chr17 65470552 65471283 ZNF143 GTRD no Epithelial (MCF-7) 108285880
chr17 65470926 65470938 TFAP2A JASPAR yes 55508870
chr17 65470926 65470938 TFAP2B JASPAR yes 55508871
chr17 65470926 65470938 TFAP2C JASPAR yes 55508872
chr17 65470931 65470952 IRF1 JASPAR yes 55508873
chr17 65470936 65470951 FOXP1 JASPAR yes 55508874
chr17 65470937 65470952 FOXP1 JASPAR yes 55508875
Genes associated with rs2916121[chr17:65470937], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More