EnhancerDB
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Enhancers that have rs292443[chr18:55871934]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs292443[chr18:55871934]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55871929 55871940 HOXC13 JASPAR yes 110926020
chr18 55871930 55871940 HOXA13 JASPAR yes 110926021
chr18 55871930 55871940 HOXB13 JASPAR yes 110926022
chr18 55871930 55871940 HOXD13 JASPAR yes 110926023
chr18 55871930 55871945 MEF2C JASPAR yes 110926024
chr18 55871931 55871946 MEF2A JASPAR yes 110926025
chr18 55871932 55871936 TEAD2 TRANSFAC yes 110926026
chr18 55871932 55871937 TBP TRANSFAC yes 110926027
chr18 55871932 55871938 TFIID TRANSFAC yes 110926028
chr18 55871932 55871943 FOXC1 JASPAR yes 110926029
chr18 55871932 55871944 MEF2A JASPAR yes 110926030
chr18 55871933 55871943 MEF2A JASPAR yes 110926031
Genes associated with rs292443[chr18:55871934], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More